6 Oct 16:02Daniel Xavier de Sousa
*(no subject)
24 Jul 16:33Daniel Xavier de Sousa
*Time of mpiBLAST
10 Jul 23:30Jeremy Archuleta
*mpiBLAST User mailing list moved
10 Jun 16:28Mike Cariaso
*Help: About .ncbirc file
10 Jun 14:54Amy Lee
*Help: About .ncbirc file
31 May 14:23Daniel Xavier de Sousa
*ERROR with NR in mpiFORMATDB too ?
30 May 17:15Daniel Xavier de Sousa
*Res: ERROR IN mpiFORMATDB?
29 May 21:44Mike Cariaso
*ERROR IN mpiFORMATDB?
29 May 17:08Daniel Xavier de Sousa
*ERROR IN mpiFORMATDB?
21 May 16:40Daniel Xavier de Sousa
*Res: MPIFORMATDB
21 May 14:54Mike Cariaso
*MPIFORMATDB
21 May 14:34Daniel Xavier de Sousa
**MPIFORMATDB
12 May 14:07Ray Muirhead
*Running mpiBLAST on Microsoft Windows Compute Cluster Server 2003 with
13 May 01:46Aaron Darling
**Running mpiBLAST on Microsoft Windows Compute Cluster Server 2003 with
10 May 03:58Mike Cariaso
*MPI Blast patch to the NCBI Toolbox Oct 2006
10 May 02:16Anoop Rajendra
*MPI Blast patch to the NCBI Toolbox Oct 2006
30 Apr 18:34Lee Amy
*Help: About NCBI Toolbox
21 Apr 20:26Mike Cariaso
*mpiblast inside Amazon EC2
18 Apr 13:06Lee Amy
*Help: About cluster
18 Apr 14:21ankit patel
**Help: About cluster
16 Apr 15:57alessandro albiero
*PROBLEM WITH MPIBLAST
19 Apr 09:57Aaron Darling
**PROBLEM WITH MPIBLAST
26 Oct 15:31Daniel Xavier de Sousa
**Problem with MPIBlast
27 Oct 06:24Joe Landman
***Problem with MPIBlast
6 Apr 23:43David Lapointe
*Error with Uniprot
10 Apr 08:16Aaron Darling
**Error with Uniprot
27 Mar 22:28Daniel Xavier de Sousa
*Res: Res: Res: Res: statistics of MPIBlast
27 Mar 02:39Mike Cariaso
*Res: statistics of MPIBlast
27 Mar 02:05Daniel Xavier de Sousa
**Res: statistics of MPIBlast
27 Mar 02:12Mike Cariaso
*file access patterns in mpiBlast
26 Mar 13:08Ruini Xue
*file access patterns in mpiBlast
23 Mar 16:03Daniel Xavier de Sousa
*statistics of MPIBlast
24 Mar 06:16Aaron Darling
**statistics of MPIBlast
20 Mar 16:57reichma
*error while using mpiblast
22 Mar 06:18Han
**error while using mpiblast
20 Mar 23:57Mike Cariaso
***error while using mpiblast
15 Mar 01:57Mike Cariaso
*Strange issue in mpiBlast limiting by "Gi"
15 Mar 01:22Mike Cariaso
*Strange issue in mpiBlast limiting by "Gi"
15 Mar 01:43Jerome
**Strange issue in mpiBlast limiting by "Gi"
15 Mar 00:55Jerome
*Strange issue in mpiBlast limiting by "Gi"
2 Mar 14:44Mike Cariaso
*blast in 1 day but could not get mpiblast done even in 10 days for the
24 Feb 15:44Heywood, Todd
*cpu time partitioning
2 Mar 07:31Aaron Darling
**cpu time partitioning
2 Mar 16:52Heywood, Todd
***cpu time partitioning
7 Mar 04:14Aaron Darling
****cpu time partitioning
21 Feb 01:09Lucas Carey
*blast in 1 day but could not get mpiblast done even in 10 days for the
20 Feb 23:49intikhab alam
*blast in 1 day but could not get mpiblast done even in 10 days for the
21 Feb 01:07Aaron Darling
**blast in 1 day but could not get mpiblast done even in 10 days for the
21 Feb 02:02intikhab alam
***blast in 1 day but could not get mpiblast done even in 10 days for the
21 Feb 02:33Aaron Darling
****blast in 1 day but could not get mpiblast done even in 10 days for the
26 Feb 13:08intikhab alam
*****blast in 1 day but could not get mpiblast done even in 10 days for the
2 Mar 10:01Aaron Darling
******blast in 1 day but could not get mpiblast done even in 10 days for the
2 Mar 13:09Joe Landman
*******blast in 1 day but could not get mpiblast done even in 10 days for the
16 Feb 16:25Brandi Cantarel
*mpiBLAST options
6 Feb 01:02Marcus_Lundberg/Rochester/IBM%
*mpiblast-pio on opteron cluster with NFS
6 Feb 06:20Heshan Lin
**mpiblast-pio on opteron cluster with NFS
30 Jan 11:52David Garcia Cortes
*Problems linking mpiblast with NCBI package libraries
31 Jan 02:47Joe Landman
**Problems linking mpiblast with NCBI package libraries
1 Feb 10:51David Garcia Cortes
***Problems linking mpiblast with NCBI package libraries
1 Feb 11:03Aaron Darling
****Problems linking mpiblast with NCBI package libraries
10 Jan 11:31Owen
*FATAL ERROR: Database was not found or does not exist
5 Dec 19:14Daniel Xavier de Sousa
*Res: One doubt...
4 Dec 15:23elizeu
*Sorry, mpiBLAST must be run on 3 or more nodes (unexpected)
1 Dec 19:55elizeu
*Compiling problems
30 Nov 13:20JOSHUA R HYMAN
*debian etch & ncbi toolbox
21 Nov 23:05goughes
*AMD x86_64 Compilation Issues (Fixed)
20 Nov 20:15goughes
*AMD x86_64 Compilation Issues (Fixed)
21 Nov 02:18darling
**AMD x86_64 Compilation Issues (Fixed)
20 Nov 00:01Daniel Xavier de Sousa
*split database on blast
19 Nov 05:51goughes
*AMD x86_64 Compilation Issues
19 Nov 05:53Joe Landman
**AMD x86_64 Compilation Issues
17 Nov 22:38goughes
*AMD x86_64 Compilation Issues
18 Nov 13:38Joe Landman
**AMD x86_64 Compilation Issues
9 Nov 12:42Daniel Xavier de Sousa
*Res: Problem to execut MPIBLAST
17 Oct 21:29LED-sales
*特供一致性很好LED白光
3 Oct 05:53Haruna Cofer
*mpi-blast bogging down in readPartialBioseqs()
29 Sep 04:29JI QI
*a mpiformatdb problem
1 Oct 08:27Aaron Darling
**a mpiformatdb problem
21 Sep 01:06Kevin M. Carr
*Very inefficient performance of mpiBLAST 1.4.0 with large datasets
21 Sep 07:09Mike Cariaso
**Very inefficient performance of mpiBLAST 1.4.0 with large datasets
21 Sep 02:44Joe Landman
**Very inefficient performance of mpiBLAST 1.4.0 with large datasets
13 Sep 04:25Andre Kaminski
*debian mpiblast
30 Aug 21:05Enis Afgan
*cp command filed during job submission
25 Aug 18:22Andre Kaminski
*(no subject)
23 Aug 00:53Mike Cariaso
*FYI. --disable-mpi-db may trigger crash?
18 Aug 11:31Ann Jee Lee
*Mpiblast-users Digest, Vol 3, Issue 4
14 Aug 18:53Ann Jee Lee
*mpisub needs --removedb ?
17 Aug 00:02Lucas Carey
**mpisub needs --removedb ?
14 Aug 18:44Ann Jee Lee
*--removedb problems
10 Aug 15:06Yijian Wang
*problem running mpiblast
2 Aug 06:11Chuming Chen
*mpiblast graphical view of search result
12 Jul 01:34Oystein Thorsen
*empty pnd file causes problems
11 Jul 03:07Mike Cariaso
*updated mpiblast for ncbi toolbox May 2006
11 Jul 15:24Anoop Rajendra
**updated mpiblast for ncbi toolbox May 2006
11 Jul 19:08Aaron Darling
***updated mpiblast for ncbi toolbox May 2006
14 Jul 15:12Mike Cariaso
****unable to access the cvs pserver, could svn resolve this?
11 Jul 15:30Mike Cariaso
***updated mpiblast for ncbi toolbox May 2006
11 Jul 01:36Oystein Thorsen
*empty pnd file causes problems
11 Jul 03:40Heshan Lin
**empty pnd file causes problems
5 Jul 05:20Peng Gu
*Help needed on benchmarking PVFS2 and LSFS-PVFS2